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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs925489 chr9:100546600 C/T CENPJ chr13:25456422-25497027:- 0.22 5.9 6.96E-9 Box Plot
THCA rs925489 chr9:100546600 C/T CLDN2 chrX:106143394-106174091:+ 0.27 6.15 1.69E-9 Box Plot
THCA rs925489 chr9:100546600 C/T EML5 chr14:89078775-89259096:- 0.3 6.89 1.77E-11 Box Plot
THCA rs925489 chr9:100546600 C/T EPDR1 chr7:37723446-37991543:+ 0.32 7.09 4.78E-12 Box Plot
THCA rs925489 chr9:100546600 C/T GGT5 chr22:24615622-24641110:- 0.26 6.01 3.65E-9 Box Plot
THCA rs925489 chr9:100546600 C/T LRRC42 chr1:54411750-54433841:+ -0.23 -6.1 2.25E-9 Box Plot
THCA rs925489 chr9:100546600 C/T NKX6-1 chr4:85413140-85419603:- 0.5 8.69 5.66E-17 Box Plot
THCA rs925489 chr9:100546600 C/T PLCE1 chr10:95790569-96092580:+ 0.27 6.23 1.01E-9 Box Plot
THCA rs926862 chr6:99465262 G/A BAALC chr8:104152938-104242533:+ 0.34 6.24 9.57E-10 Box Plot
THCA rs9283884 chr6:28135660 C/G BTN3A2 chr6:26365387-26378548:+ 0.3 6.28 7.53E-10 Box Plot
THCA rs9286062 chr8:11118527 G/A SGK223 chr8:8175258-8244008:- 0.36 7.21 2.25E-12 Box Plot
THCA rs9287507 chr2:132214856 G/A CCDC74B chr2:130896860-130902707:- 0.36 6.8 3.2E-11 Box Plot
THCA rs9287519 chr2:132277465 G/A CCDC74B chr2:130896860-130902707:- 0.42 7.31 1.12E-12 Box Plot
THCA rs9287520 chr2:132277686 C/T CCDC74B chr2:130896860-130902707:- 0.4 7.12 3.9E-12 Box Plot
THCA rs9293533 chr5:72477215 G/A MPP5 chr14:67707826-67802536:+ 0.18 5.99 4.14E-9 Box Plot